BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D12LP1|AL429572
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1736 0.0
>3x_Contig1639
Length = 14140
Score = 1736 bits (875), Expect = 0.0
Identities = 878/880 (99%)
Strand = Plus / Minus
Query: 1 gatcagcctcacgtcaaaagtacagaaagtcaacaacctgcagattcagatataagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7982 gatcagcctcacgtcaaaagtacagaaagtcaacaacctgcagattcagatataagacaa 7923
Query: 61 tttcagggaccaaatagttagtactctgaaacacttgaaaaagaaaaaatagaatccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7922 tttcagggaccaaatagttagtactctgaaacacttgaaaaagaaaaaatagaatccaag 7863
Query: 121 ggcacatgaaaccacagctgcttgcgatattgaggtattgggtatcataaacaagggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7862 ggcacatgaaaccacagctgcttgcgatattgaggtattgggtatcataaacaagggtta 7803
Query: 181 cagtatgttttaacgcaggtaattgatacacttttaacgttccggctcccttgggattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7802 cagtatgttttaacgcaggtaattgatacacttttaacgttccggctcccttgggattat 7743
Query: 241 gaaacatgaacgtattgaattaactttgataattcagtgacataaatactgaatgtaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7742 gaaacatgaacgtattgaattaactttgataattcagtgacataaatactgaatgtaata 7683
Query: 301 gccactttttttctgctattttctgactcttcgttggttgactttacacgcttggatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7682 gccactttttttctgctattttctgactcttcgttggttgactttacacgcttggatttg 7623
Query: 361 gtgcttaagcaccattgcagacgcgtaacttttcggcgtccatgaaaccagaggaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7622 gtgcttaagcaccattgcagacgcgtaacttttcggcgtccatgaaaccagaggaaaaaa 7563
Query: 421 tagaagaataactaagatggaaatagaaacagaaacacgaacggtgatccagacgcaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7562 tagaagaataactaagatggaaatagaaacagaaacacgaacggtgatccagacgcaaat 7503
Query: 481 gaacgaacttattctacataatgaagctactgtcattaatacaatttatgttgatcaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7502 gaacgaacttattctacataatgaagctactgtcattaatacaatttatgttgatcaata 7443
Query: 541 ctatcgagcatcaaatactttaccatatgcattaactaccgtctcgacagcgtttgcmac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7442 ctatcgagcatcaaatactttaccatatgcattaactaccgtctcgacagcgtttgcaac 7383
Query: 601 tcaactgaacaaaaatgttaaaactgcaactattacaaatcaagtcaccactacgattga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7382 tcaactgaacaaaaatgttaaaactgcaactattacaaatcaagtcaccactacgattga 7323
Query: 661 nacttctcaagaatccacctctactagttctacatcccatagcagtagctcattgggagt 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7322 aacttctcaagaatccacctctactagttctacatcccatagcagtagctcattgggagt 7263
Query: 721 tcagagtagtcaatcagcgagaatgacatcaggaatctccttgaacagtctagccagtac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7262 tcagagtagtcaatcagcgagaatgacatcaggaatctccttgaacagtctagccagtac 7203
Query: 781 atcggatggaaaaaatactagtggtaccattttaggtcttgccataggattaccaattgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7202 atcggatggaaaaaatactagtggtaccattttaggtcttgccataggattaccaattgc 7143
Query: 841 cttgtttgtcgttggattgggaattgtgttcgggttcttg 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 7142 cttgtttgtcgttggattgggaattgtgttcgggttcttg 7103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6578
Number of Sequences: 1807
Number of extensions: 6578
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)